The Scripps Research Institute
The Doctor of Philosophy in Bioinformatics (PhD)is an interdisciplinary program that combines the application of computer technology to the management and analysis of biological data. The result is that computers are being used to organize data generated from experiments into databases, develop new algorithms and software, and use this software for the interpretation and analysis of the data into meaningful biological information. For the past ten years, our PhD program has been training students to organize, visualize, analyze and interpret biological data. Students have access to world renowned bioinformaticians at the University of British Columbia, Simon Fraser University and the BC Cancer Agency, and have exposure to the latest technologies to develop their skills.
Strategic Program Objectives:
The Bioinformatics PhD program integrates academic centres in computer science, statistics, molecular biology and biotechnology, with translational groups at hospitals and at the clinical interface. The innovative partnership among the University of British Columbia, Simon Fraser University and the BC Cancer Agency allows students' access to experts in the field of bioinformatics, and exposure to original research and opportunities to complete significant practical work on real bioinformatics problems. Internships allow student mobility between Canadian and international universities, institutions and industries to further enhance collaborations among Canadian high-technology research groups in both the private and public sectors.
The major requirement for the Ph.D. is completion of a research dissertation meeting the Faculty of Graduate and Postdoctoral Studies requirements. There are no specific course requirements for the Ph.D. degree program apart from the dissertation. However, the student's Ph.D. dissertation committee has the prerogative to impose course requirements where course deficiencies are perceived.
All doctoral students are required to successfully complete a comprehensive examination, which consists of an oral and written component within the first 36 months of study. All students are required to present a Bioinformatics graduate program seminar upon completion of their program, and before their dissertation defense.
A student's committee for the doctorate will consist of the dissertation supervisor and three others. The supervisor and at least one other member must be members of the Bioinformatics graduate program.
Students must secure a supervisor before they can be admitted into the program. As well, they must meet the minimum admission requirements set out by Graduate and Post-doctoral Studies at UBC.
The Faculty of Graduate and Postdoctoral Studies establishes the minimum admission requirements common to all applicants, usually a minimum overall average in the B+ range (76% at UBC). The graduate program that you are applying to may have additional requirements. Please review the specific requirements for applicants with credentials from institutions in:
Each program may set higher academic minimum requirements. Please review the program website carefully to understand the program requirements. Meeting the minimum requirements does not guarantee admission as it is a competitive process.
Applicants from a university outside Canada in which English is not the primary language of instruction must provide results of an English language proficiency examination as part of their application. Tests must have been taken within the last 24 months at the time of submission of your application.
Minimum requirements for the two most common English language proficiency tests to apply to this program are listed below:
Overall score requirement: 100
Overall score requirement: 7.0
Some programs require additional test scores such as the Graduate Record Examination (GRE) or the Graduate Management Test (GMAT). The requirements for this program are:
The GRE is not required.
Students admitted to the Ph.D. degree program normally possess an M.Sc. degree in Bioinformatics or a related area, with clear evidence of research ability or potential.
CV, Official transcripts, three letters of reference, Official English exam scores (if required)
All applicants have to submit transcripts from all past post-secondary study. Document submission requirements depend on whether your institution of study is within Canada or outside of Canada.
A minimum of three references are required for application to graduate programs at UBC. References should be requested from individuals who are prepared to provide a report on your academic ability and qualifications.
Many programs require a statement of interest, sometimes called a "statement of intent", "description of research interests" or something similar.
Students in research-based programs usually require a faculty member to function as their supervisor. Please follow the instructions provided by each program whether applicants should contact faculty members.
Permanent Residents of Canada must provide a clear photocopy of both sides of the Permanent Resident card.
All applicants must complete an online application form and pay the application fee to be considered for admission to UBC.
Students who secure an NSERC-CREATE scholarship will undertake a 3-4 month internship that may be local, within Canada or at an international University or Institution.
Bioinformatics faculty are spread throughout the UBC campus, as well as off-campus at the BC Cancer Research Centre or hospital research labs and Institutions.
|Fees||Canadian Citizen / Permanent Resident / Refugee / Diplomat||International|
|Installments per year||3||3|
|Tuition per installment||$1,732.53||$3,043.77|
|Tuition per year|
(plus annual increase, usually 2%-5%)
|Int. Tuition Award (ITA) per year (if eligible)||$3,200.00 (-)|
|Other Fees and Costs|
|Student Fees (yearly)||$969.17 (approx.)|
|Costs of living (yearly)||starting at $17,242.00 (check cost calculator)|
Applicants to UBC have access to a variety of funding options, including merit-based (i.e. based on your academic performance) and need-based (i.e. based on your financial situation) opportunities.
All students accepted by a faculty member and enrolled in the program will be paid a minimum stipend of $24,300/year. Applicants who are interested in the organization and management of data, the development of algorithms and software, and application of these approaches to questions in wide-ranging areas of biology may consider the NSERC-CREATE funded Training Program in High-Dimensional Bioinformatics that provides additional funding and professional development opportunities.
All applicants are encouraged to review the awards listing to identify potential opportunities to fund their graduate education. The database lists merit-based scholarships and awards and allows for filtering by various criteria, such as domestic vs. international or degree level.
Graduate programs may have Teaching Assistantships available for registered full-time graduate students. Full teaching assistantships involve 12 hours work per week in preparation, lecturing, or laboratory instruction although many graduate programs offer partial TA appointments at less than 12 hours per week. Teaching assistantship rates are set by collective bargaining between the University and the Teaching Assistants' Union.
Many professors are able to provide Research Assistantships (GRA) from their research grants to support full-time graduate students studying under their direction. The duties usually constitute part of the student's graduate degree requirements. A Graduate Research Assistantship is a form of financial support for a period of graduate study and is, therefore, not covered by a collective agreement. Unlike other forms of fellowship support for graduate students, the amount of a GRA is neither fixed nor subject to a university-wide formula. The stipend amounts vary widely, and are dependent on the field of study and the type of research grant from which the assistantship is being funded. Some research projects also require targeted research assistance and thus hire graduate students on an hourly basis.
Canadian and US applicants may qualify for governmental loans to finance their studies. Please review eligibility and types of loans.
All students may be able to access private sector or bank loans.
Many foreign governments provide support to their citizens in pursuing education abroad. International applicants should check the various governmental resources in their home country, such as the Department of Education, for available scholarships.
The possibility to pursue work to supplement income may depend on the demands the program has on students. It should be carefully weighed if work leads to prolonged program durations or whether work placements can be meaningfully embedded into a program.
Canadian residents with RRSP accounts may be able to use the Lifelong Learning Plan (LLP) which allows students to withdraw amounts from their registered retirement savings plan (RRSPs) to finance full-time training or education for themselves or their partner.
Please review Filing taxes in Canada on the student services website for more information.
Applicants have access to the cost calculator to develop a financial plan that takes into account various income sources and expenses.
12 students graduated between 2005 and 2013. Of these, career information was obtained for 12 alumni (based on research conducted between Feb-May 2016):
These statistics show data for the Doctor of Philosophy in Bioinformatics (PhD). Data are separated for each degree program combination. You may view data for other degree options in the respective program profile.
This list shows faculty members with full supervisory privileges who are affiliated with this program. It is not a comprehensive list of all potential supervisors as faculty from other programs or faculty members without full supervisory privileges can request approvals to supervise graduate students in this program.
|2016||Human genome sequencing is now being used to discover the cause of genetic diseases. Dr. Shyr's research improves the way doctors interpret a patient's DNA, and presents a novel computational algorithm to analyze DNA data. Collaborating with the BC Children's Hospital, his research provides patients with access to personalized treatments.|
|2016||Dr. Chen studied Bioinformatics to examine gene regulation as it applies to biological hypotheses. Her work contributes to a better understanding of the hierarchical regulation of genes and the differential expression between the sexes. This work will further our understanding of diseases and phenotypes.|
|2016||Dr. Lim studied gene and microRNA expressions in cancer. She discovered patterns that are associated with cancer development & treatment resistance. Her results can be used towards the design of diagnostic tests to identify patients who are unlikely to respond to standard therapy and may be better served with more aggressive & experimental therapies.|
|2016||Dr. Roth developed statistical models for studying the genomes of cancer cells. These models have been widely applied in the cancer genomics community to study the evolution of tumours. This work contributes significantly to our ability to diagnose and treat cancer.|
|2016||Dr. Lai used computer science to study how RNA molecules fold inside of the body. By reviewing the latest methods, he published new benchmarks and guidelines for the prediction of RNA structures. This knowledge can help researchers in finding and understanding novel RNA molecules within unexplored regions of the human genome.|
|2015||Dr. Kasaian studied the molecular cause of several head and neck endocrine malignancies. While the commonly diagnosed papillary thyroid carcinomas harbored very few mutations, the rare but deadly anaplastic thyroid cancers were found to have accrued numerous genomic alterations. Molecular analysis hinted to potential drug targets in some patients.|
|2015||Dr. Li used computer-aided design methods to develop small, novel drug molecules for the treatment of prostate cancer. The new strategy used in this work found molecules that might be able to treat advanced prostate cancer. It is hoped that these molecules will help overcome drug resistance and prevent the disease from progressing.|
|2015||Dr. Hunt developed computational approaches to improve detection of regions in the human genome that are dedicated to the regulation of gene expression. Her research has improved our understanding and interpretation of large-scale genomics data, and her findings will directly impact the clinical analysis of human DNA sequences.|
|2015||Dr. O'Neill completed his doctoral studies in bioinformatics at the BC Cancer Research Centre. He developed and applied computational methods for analysing data from many cells of many cancer patients at the same time. These methods will aid researchers in finding new drug targets and clinical tests for acute myeloid leukemia and other cancers.|
|2015||Dr. Hanson studies genes and genomes that have been obtained from the environment. He developed MetaPathways, an analytical software that can be applied to this biological 'Big Data'. This work provides researchers and clinicians with a powerful framework that can be used to compare gene and genomes from oceans, soils and the human intestinal tract.|