Research Classification
Research Interests
Relevant Thesis-Based Degree Programs
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Research Methodology
Recruitment
oral cancer screening
early detection
markers of progression
Graduate students with clinical background preferable.
Complete these steps before you reach out to a faculty member!
Check requirements
- Familiarize yourself with program requirements. You want to learn as much as possible from the information available to you before you reach out to a faculty member. Be sure to visit the graduate degree program listing and program-specific websites.
- Check whether the program requires you to seek commitment from a supervisor prior to submitting an application. For some programs this is an essential step while others match successful applicants with faculty members within the first year of study. This is either indicated in the program profile under "Admission Information & Requirements" - "Prepare Application" - "Supervision" or on the program website.
Focus your search
- Identify specific faculty members who are conducting research in your specific area of interest.
- Establish that your research interests align with the faculty member’s research interests.
- Read up on the faculty members in the program and the research being conducted in the department.
- Familiarize yourself with their work, read their recent publications and past theses/dissertations that they supervised. Be certain that their research is indeed what you are hoping to study.
Make a good impression
- Compose an error-free and grammatically correct email addressed to your specifically targeted faculty member, and remember to use their correct titles.
- Do not send non-specific, mass emails to everyone in the department hoping for a match.
- Address the faculty members by name. Your contact should be genuine rather than generic.
- Include a brief outline of your academic background, why you are interested in working with the faculty member, and what experience you could bring to the department. The supervision enquiry form guides you with targeted questions. Ensure to craft compelling answers to these questions.
- Highlight your achievements and why you are a top student. Faculty members receive dozens of requests from prospective students and you may have less than 30 seconds to pique someone’s interest.
- Demonstrate that you are familiar with their research:
- Convey the specific ways you are a good fit for the program.
- Convey the specific ways the program/lab/faculty member is a good fit for the research you are interested in/already conducting.
- Be enthusiastic, but don’t overdo it.
Attend an information session
G+PS regularly provides virtual sessions that focus on admission requirements and procedures and tips how to improve your application.
ADVICE AND INSIGHTS FROM UBC FACULTY ON REACHING OUT TO SUPERVISORS
These videos contain some general advice from faculty across UBC on finding and reaching out to a potential thesis supervisor.
Graduate Student Supervision
Doctoral Student Supervision
Dissertations completed in 2010 or later are listed below. Please note that there is a 6-12 month delay to add the latest dissertations.
Evaluation of DNA image cytology for detection and risk prediction of oral dysplasia - clinical and community settings (2023)
It is believed the majority of oral cancers are preceded by an oral potentially malignant lesion (OPML). Histopathological diagnosis of an OPML is required to determine the presence of dysplasia. However, it is challenging for clinicians to identify which lesions to biopsy. The increasing degree of dysplasia is associated with increasing risk of malignant transformation. Although low-grade dysplasias make up the majority of the dysplasias diagnosed, it is difficult to predict their individual risk of malignant progression. DNA ploidy, measured using DNA image cytometry (DNA-ICM), has shown to be a biomarker for dysplasia and malignancy in various sites including the oral cavity. In this thesis, three research projects were developed to explore the role of DNA-ICM as a triage and screening tool for oral LGD. The first project revealed that the combination of DNA ploidy and chromatin organization measurement using LGD lesion brushings was a strong predictor of progression. Further, temporal assessment of ploidy helped us identify risk patterns of progression among oral LGDs, which can be useful for clinicians to determine triage and management of LGDs. The second project aimed to conduct oral cancer screening in a high-risk population in British Columbia (BC) and assess the use of DNA-ICM and fluorescent visualization (FV) as adjunct screening tools. Our results confirmed previous findings, where South Asian immigrants in BC showed a higher prevalence of low-grade dysplasia than the general Vancouver population. No abnormal DNA-ICM findings were noted in the small number of dysplasias detected. The final project aimed to assess the effectiveness of DNA-ICM combined with cytology and FV as an adjunct screening tool for community oral cancer screening in rural India. Results showed that DNA-ICM along with cytology showed satisfactory sensitivity and specificity in detecting dysplasias and identified additional lesions that required biopsy. This work shows that DNA-ICM when combined with cytology can serve as a non-invasive, cost-effective screening tool and aid clinicians to triage LGDs to detect progression early. This work also helps gain understanding on the role of DNA aneuploidy in oral cancer.
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Improving risk prediction for the malignant transformation of low-grade oral dysplasia - clinicopathological features and loss of heterozygosity (2018)
A major barrier to oral cancer prevention is the lack of risk predictors for the malignant progression of oral potentially malignant lesions (OPML). OPML with evidence of dysplasia are at risk of progressing to oral cancer. However, not all will progress and predicting which low- grade dysplasia (LGD; mild/moderate dysplasia) are at risk of progression is challenging. The overall goal of this thesis was to advance risk stratification and to improve the prediction of malignant progression in LGD. Three research projects were developed to accomplish this goal. Each identified important insights into the phenotypic changes associated with malignant transformation and advanced risk prediction by exploring the association between histological, clinical and molecular biomarkers and malignant progression. The first project revealed that dysplasia with or without lichenoid mucositis (LM) had similar cancer risk and that pathologists and clinicians should not discount dysplasia in the presence of LM. The second project compared the clinical and molecular features of LGD in smokers in contrast to those of non-smokers (NS) and confirmed that NS possess an increased risk of progression, and progressed more quickly, than smokers. These findings emphasize the need for clinicians to consider smoking history (or the lack thereof) and molecular profiles in the triage and management of LGD. The final project aimed to advance a risk prediction model using microsatellite analysis for loss of heterozygosity (LOH) and repeated measures of clinicopathological features. Multivariable analysis showed that after LOH risk category, temporal repeated measures of toluidine blue status was the most significant predictor of progression. Two risk prediction models are presented and provide a systematic decision-making process for these very heterogeneous group of lesions. Patients at higher risk could be offered intensified surveillance or targeted interventions based on their predicted risk of disease, while patients at low risk would be spared from excessive screening and treatment. This body of work has advanced the risk stratification of LGD and presents an important framework to give scientists and clinicians a better view into the natural history of the disease and a novel approach to integrate repeated measurements of change over time into risk models.
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Master's Student Supervision
Theses completed in 2010 or later are listed below. Please note that there is a 6-12 month delay to add the latest theses.
E-cadherin and beta-catenin expression in oral epithelial dysplasia : predicting progression to cancer (2023)
Objectives: The epithelial-mesenchymal transition (EMT) is a biological process involved in cancer development and entails epithelial cells progressively gaining mesenchymal traits. The loss of the cell adhesion protein E-cadherin is a hallmark feature of EMT and may play a role in early malignant progression through its interaction with beta-catenin in the Wnt pathway. Expression of E-cadherin and beta-catenin is altered from normal oral tissue, oral epithelial dysplasia (OED), to oral squamous cell carcinoma (OSCC), but there is no literature on the roles of these proteins in early malignant progression. The purpose of this study was to explore E-cadherin and beta-catenin expression in OED and to determine whether such expression patterns predict malignant progression. Methods: This case-control pilot study sampled 29 progressors (PR) and 58 non-progressors (NPR) from the Oral Cancer Prediction Longitudinal study. Participants with an initial diagnosis of low-grade dysplasia OED and no previous history of oral cancer were included. PRs were participants that progressed to severe OED, carcinoma in-situ, or OSCC, while NPRs were those that did not progress. Formalin-fixed paraffin-embedded tissue sections were immunohistochemically stained to assess for low membranous E-cadherin, and low membranous and high cytoplasmic and/or nuclear beta-catenin expression in select epithelial layers (basal, parabasal, lower spinous, and upper spinous) and the entire epithelium in PRs compared to NPRs. For membranous staining, low expression was defined as negative or weak staining, while high expression was moderate or strong staining. In the cytoplasm and nucleus, low expression was defined as an absence of stain, and high expression was the presence of stain. The Mann-Whitney U, Chi-square, Fisher’s exact test, and logistic regression were used in statistical analysis. Results: The basal (P=0.55), lower spinous (P=0.62), and upper spinous layer (P=0.45) had a greater, but insignificant, proportion of progressors with low membranous E-cadherin expression. For membranous beta-catenin, the parabasal (P=0.53) and lower spinous layer (P=0.62) had a greater proportion of progressors with low expression, but again insignificant. Few samples showed cytoplasmic and/or nuclear beta-catenin staining. Conclusion: The expression patterns of E-cadherin and beta-catenin in OED did not predict malignant progression. Future research should incorporate quantitative digital analysis.
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Oral cancer and dysplasia trends among South Asians in British Columbia: Lesion sites, risk habits, and access to care (2017)
Objectives: While oral cancer is one of the most common malignancies across the globe, the vast majority of cases arise in South Asian countries. Currently in British Columbia, nearly 10% of the population is of South Asian ethnicity. Evidence suggests that risk factors within this population play a significant role in oral cancer incidence and clinical presentation. As a significant subgroup, it is crucial to gain insight into the trends of oral precancerous and cancerous lesions in this population. This thesis aims to explore differences in oral cancer, dysplasia and hyperplasia between South Asians and the general population, as well as differences in anatomical lesion sites and access to care. This thesis also examines biopsy activity by dental practitioners across the province. Methods: Data from the British Columbia Oral Biopsy Service (OBS) and the British Columbia Cancer Registry (BCCR) were used to identify cases of squamous cell carcinoma, carcinoma in situ, dysplasia, and hyperplasia in the oral cavity in British Columbia in 2007 and 2013. Name recognition software programs were utilized to determine ethnicity. Results: Oral cancer, dysplasia, and hyperplasia trends vary between South Asians and the general population. There are more cases among South Asian males than males in the general population. South Asian cases are diagnosed at younger ages than in the general population, with a mean age at diagnosis below the age of sixty years. While common lesion sites among South Asians include the gingiva and buccal mucosa, these lesion sites are common within the general population as well. The number of biopsies received by the OBS increased by 36% from 2007 to 2013. The number of dental practitioners performing biopsies also increased, as well as the overall number of South Asian cases seen in the OBS. Conclusion: Results from this thesis provide current information regarding trends and risk factors for hyperplasias, dysplasias, and oral cancers in the South Asian population in BC. These findings, along with spatial analysis of biopsy trends, provide a basis for tailored screening programs and oral cancer prevention initiatives in British Columbia.
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Integrating fluorescence visualization with clinical markers to predict oral cancer recurrences (2016)
One reason for the poor survival rate of oral cancer is the high rate of recurrence (REC). The objective of this study is to investigate how fluorescence visualization (FV) may play in the prediction of oral cancer REC at a site previously treated for oral cancer. We will confirm previously identified clinical factors for REC such as lesion presence and TB status, and analyze if any combinations of these three factors at varying follow-up time intervals can suggest a higher risk for REC. Information for this study will come from patients enrolled in the BC Oral Cancer Prediction Longitudinal study. Patients are eligible if: 1) they had a primary tumour diagnosis of SCC or CIS; 2) were treated with curative intent; and 3) had at least one recall visit within one year after completion of initial treatment. Data analyzed: 1) demographic and lifestyle habit information; 2) primary tumour information; 3) oral clinicopathological features during follow-up at 6, 12, 18, and 24 months. For this thesis, 232 patients have been identified that fit the inclusion criteria. Of those, 34 patients developed recurrence, and 198 patients remained tumour free throughout their follow-up period. Demographic, smoking, alcohol and FV status were not found to be associated with a recurrence. Of significance, OPL status at all follow-up intervals (P0.01), TB at 6, 12, 24 months (P0.05), and TBFV at 6 and 12 months (P0.05) were associated with REC. There is a higher percentage of REC in patients with TB+FV+ status than other combinations of TBFV status, with significance found at 6 and 12 months follow-up post-treatment. With known risk factors for predicting REC, clinicians can recognize patients at increased risk, improving the chance of early detection. This can also drive clinician decision-making for patients deemed high-risk, increasing surveillance and improving patient care.
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Oral Second Primary Tumour Risk Predictors: Clinical Factors and Loss of Heterozygosity (2014)
Oral squamous cell carcinoma (SCC) has a poor survival rate mainly due to late stage diagnosis and the high risk of developing second primary tumours (SPTs). Risk factors associated with progression of primary oral premalignant lesions (OPLs) to SCC have been validated; however, little research has been done on the risk predictors of SPTs. The objective of this thesis was to identify the demographic, clinicopathological and molecular risk factors associated with oral SPTs as well as those associated with second oral premalignant lesion (SOPL) progression to an oral SPT. From a cohort of the Oral Cancer Prediction Longitudinal study, data collected included: 1) demographic and habit information; 2) primary tumour information; 3) clinicopathological features during follow-up; and 4) toluidine blue (TB) and florescence visualization results. SOPL biopsy samples were analyzed for loss of heterozygosity (LOH) at regions previously identified as high risk for primary OPL progression. Of 296 patients who were followed-up subsequent to curative primary tumour treatment, 23 (8%) developed SPTs. Sixty-seven (23%) patients developed SOPLs, of which nine (14.5%) progressed to SPTs. Patients with primary tumours located on low-risk sites had an increased risk of SPTs (P=0.004) and SOPLs (P=0.009). Tobacco (P=0.046) and alcohol consumption (P=0.019) were each associated with the presence of SOPLs. The presence of an SOPL was associated with risk for SPT development, independent from histopathological diagnosis (P0.001). TB was not only effective in identifying SPT development but was a valuable tool for predicting SOPL risk of progression to an SPT. Additionally, the majority of SOPLs had an LOH on at least one of the three chromosomal arms (9p, 3p and17p). The results suggest it is necessary to increase surveillance, to roughly six years following treatment in order to improve on the early detection of SOPLs and address the risk factors for SPTs. Data also supports the need to routinely biopsy SOPLs in order to provide a timely diagnosis and provide samples for the analysis of LOH. Ultimately translating this knowledge to the clinical management of patients has the potential to identify patients who are at high-risk for SPTs and improve long-term survival rates.
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